There are plenty of games on PC where I find myself more comfortable using a controller… and for some its just more easier to use a PC. I guess its to do with the movement/targeting setup of the game.
I was WoW (World of Warcraft) player back in my college years and using mouse and keyboard was a no brainer. You have the cursor you can use to click on just about anywhere on the screen plus targeting.
Move on to another game DC Universe online, (which is set up a little differently) where you cant select things with a cursor unless you open inventory / or open dialogue with an npc. The targeting is controlled by you moving the camera to a particular direction. On this game, I just couldn’t get used to the mouse and keyboard and was more comfortable with a controller, while my colleagues found it easy to use the keyboard.
Its hard to explain visually unless you have played both games on the PC. Theres a term used for each control system which escapes me at the moment. Another equivalent comparison would be WoW vs TERA control system.
I guess you have to reach a compromise somehow in how you want your controls to be set up. Maybe theres a way to get the best of both worlds. Will get screenshots / videos to show differences when I get time.